PoplarV1, Main, Exploration, bibRecord, 003151

Proteomics of plasma membranes from poplar trees reveals tissue distribution of transporters, receptors, and proteins in cell wall formation.

Identifieur interne : 003151 ( Main/Exploration ); précédent : 003150; suivant : 003152

Proteomics of plasma membranes from poplar trees reveals tissue distribution of transporters, receptors, and proteins in cell wall formation.

Auteurs : Robert Nilsson [Suède] ; Katja Bernfur ; Niklas Gustavsson ; Joakim Bygdell ; Gunnar Wingsle ; Christer Larsson

Source :

Molecular & cellular proteomics : MCP [ 1535-9484 ] ; 2010.

RBID : pubmed:19955078

Descripteurs français

KwdFr :
- Arbres (métabolisme), Bois (métabolisme), Feuilles de plante (métabolisme), Membrane cellulaire (métabolisme), Paroi cellulaire (métabolisme), Peptides (métabolisme), Phloème (métabolisme), Phylogenèse (MeSH), Populus (cytologie), Populus (métabolisme), Protéines de transport membranaire (métabolisme), Protéines végétales (métabolisme), Protéomique (méthodes), Récepteurs de surface cellulaire (métabolisme), Solubilité (MeSH), Spectrométrie de masse (MeSH), Spécificité d'organe (MeSH), Transporteurs ABC (métabolisme).
MESH :
- cytologie : Populus.
- métabolisme : Arbres, Bois, Feuilles de plante, Membrane cellulaire, Paroi cellulaire, Peptides, Phloème, Populus, Protéines de transport membranaire, Protéines végétales, Récepteurs de surface cellulaire, Transporteurs ABC.
- méthodes : Protéomique.
- Phylogenèse, Solubilité, Spectrométrie de masse, Spécificité d'organe.

English descriptors

KwdEn :
- ATP-Binding Cassette Transporters (metabolism), Cell Membrane (metabolism), Cell Wall (metabolism), Mass Spectrometry (MeSH), Membrane Transport Proteins (metabolism), Organ Specificity (MeSH), Peptides (metabolism), Phloem (metabolism), Phylogeny (MeSH), Plant Leaves (metabolism), Plant Proteins (metabolism), Populus (cytology), Populus (metabolism), Proteomics (methods), Receptors, Cell Surface (metabolism), Solubility (MeSH), Trees (metabolism), Wood (metabolism).
MESH :
- chemical , metabolism : ATP-Binding Cassette Transporters, Membrane Transport Proteins, Peptides, Plant Proteins, Receptors, Cell Surface.
- cytology : Populus.
- metabolism : Cell Membrane, Cell Wall, Phloem, Plant Leaves, Populus, Trees, Wood.
- methods : Proteomics.
- Mass Spectrometry, Organ Specificity, Phylogeny, Solubility.

Abstract

By exploiting the abundant tissues available from Populus trees, 3-4 m high, we have been able to isolate plasma membranes of high purity from leaves, xylem, and cambium/phloem at a time (4 weeks after bud break) when photosynthesis in the leaves and wood formation in the xylem should have reached a steady state. More than 40% of the 956 proteins identified were found in the plasma membranes of all three tissues and may be classified as "housekeeping" proteins, a typical example being P-type H(+)-ATPases. Among the 213 proteins predicted to be integral membrane proteins, transporters constitute the largest class (41%) followed by receptors (14%) and proteins involved in cell wall and carbohydrate metabolism (8%) and membrane trafficking (8%). ATP-binding cassette transporters (all members of subfamilies B, C, and G) and receptor-like kinases (four subfamilies) were two of the largest protein families found, and the members of these two families showed pronounced tissue distribution. Leaf plasma membranes were characterized by a very high proportion of transporters, constituting almost half of the integral proteins. Proteins involved in cell wall synthesis (such as cellulose and sucrose synthases) and membrane trafficking were most abundant in xylem plasma membranes in agreement with the role of the xylem in wood formation. Twenty-five integral proteins and 83 soluble proteins were exclusively found in xylem plasma membranes, which identifies new candidates associated with cell wall synthesis and wood formation. Among the proteins uniquely found in xylem plasma membranes were most of the enzymes involved in lignin biosynthesis, which suggests that they may exist as a complex linked to the plasma membrane.

DOI: 10.1074/mcp.M900289-MCP200
PubMed: 19955078
PubMed Central: PMC2830847

Affiliations:

Suède

Links toward previous steps (curation, corpus...)

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Le document en format XML

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<term>Mass Spectrometry (MeSH)</term>
<term>Membrane Transport Proteins (metabolism)</term>
<term>Organ Specificity (MeSH)</term>
<term>Peptides (metabolism)</term>
<term>Phloem (metabolism)</term>
<term>Phylogeny (MeSH)</term>
<term>Plant Leaves (metabolism)</term>
<term>Plant Proteins (metabolism)</term>
<term>Populus (cytology)</term>
<term>Populus (metabolism)</term>
<term>Proteomics (methods)</term>
<term>Receptors, Cell Surface (metabolism)</term>
<term>Solubility (MeSH)</term>
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<term>Feuilles de plante (métabolisme)</term>
<term>Membrane cellulaire (métabolisme)</term>
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<term>Phloème (métabolisme)</term>
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<term>Populus (métabolisme)</term>
<term>Protéines de transport membranaire (métabolisme)</term>
<term>Protéines végétales (métabolisme)</term>
<term>Protéomique (méthodes)</term>
<term>Récepteurs de surface cellulaire (métabolisme)</term>
<term>Solubilité (MeSH)</term>
<term>Spectrométrie de masse (MeSH)</term>
<term>Spécificité d'organe (MeSH)</term>
<term>Transporteurs ABC (métabolisme)</term>
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<term>Plant Proteins</term>
<term>Receptors, Cell Surface</term>
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<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Cell Membrane</term>
<term>Cell Wall</term>
<term>Phloem</term>
<term>Plant Leaves</term>
<term>Populus</term>
<term>Trees</term>
<term>Wood</term>
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<term>Bois</term>
<term>Feuilles de plante</term>
<term>Membrane cellulaire</term>
<term>Paroi cellulaire</term>
<term>Peptides</term>
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<term>Populus</term>
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<term>Protéines végétales</term>
<term>Récepteurs de surface cellulaire</term>
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<keywords scheme="MESH" xml:lang="en"><term>Mass Spectrometry</term>
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<term>Phylogeny</term>
<term>Solubility</term>
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<front><div type="abstract" xml:lang="en">By exploiting the abundant tissues available from Populus trees, 3-4 m high, we have been able to isolate plasma membranes of high purity from leaves, xylem, and cambium/phloem at a time (4 weeks after bud break) when photosynthesis in the leaves and wood formation in the xylem should have reached a steady state. More than 40% of the 956 proteins identified were found in the plasma membranes of all three tissues and may be classified as "housekeeping" proteins, a typical example being P-type H(+)-ATPases. Among the 213 proteins predicted to be integral membrane proteins, transporters constitute the largest class (41%) followed by receptors (14%) and proteins involved in cell wall and carbohydrate metabolism (8%) and membrane trafficking (8%). ATP-binding cassette transporters (all members of subfamilies B, C, and G) and receptor-like kinases (four subfamilies) were two of the largest protein families found, and the members of these two families showed pronounced tissue distribution. Leaf plasma membranes were characterized by a very high proportion of transporters, constituting almost half of the integral proteins. Proteins involved in cell wall synthesis (such as cellulose and sucrose synthases) and membrane trafficking were most abundant in xylem plasma membranes in agreement with the role of the xylem in wood formation. Twenty-five integral proteins and 83 soluble proteins were exclusively found in xylem plasma membranes, which identifies new candidates associated with cell wall synthesis and wood formation. Among the proteins uniquely found in xylem plasma membranes were most of the enzymes involved in lignin biosynthesis, which suggests that they may exist as a complex linked to the plasma membrane.</div>
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<Abstract><AbstractText>By exploiting the abundant tissues available from Populus trees, 3-4 m high, we have been able to isolate plasma membranes of high purity from leaves, xylem, and cambium/phloem at a time (4 weeks after bud break) when photosynthesis in the leaves and wood formation in the xylem should have reached a steady state. More than 40% of the 956 proteins identified were found in the plasma membranes of all three tissues and may be classified as "housekeeping" proteins, a typical example being P-type H(+)-ATPases. Among the 213 proteins predicted to be integral membrane proteins, transporters constitute the largest class (41%) followed by receptors (14%) and proteins involved in cell wall and carbohydrate metabolism (8%) and membrane trafficking (8%). ATP-binding cassette transporters (all members of subfamilies B, C, and G) and receptor-like kinases (four subfamilies) were two of the largest protein families found, and the members of these two families showed pronounced tissue distribution. Leaf plasma membranes were characterized by a very high proportion of transporters, constituting almost half of the integral proteins. Proteins involved in cell wall synthesis (such as cellulose and sucrose synthases) and membrane trafficking were most abundant in xylem plasma membranes in agreement with the role of the xylem in wood formation. Twenty-five integral proteins and 83 soluble proteins were exclusively found in xylem plasma membranes, which identifies new candidates associated with cell wall synthesis and wood formation. Among the proteins uniquely found in xylem plasma membranes were most of the enzymes involved in lignin biosynthesis, which suggests that they may exist as a complex linked to the plasma membrane.</AbstractText>
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Proteomics of plasma membranes from poplar trees reveals tissue distribution of transporters, receptors, and proteins in cell wall formation.

Proteomics of plasma membranes from poplar trees reveals tissue distribution of transporters, receptors, and proteins in cell wall formation.

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